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A hybrid three-scale model of tumor growth
Published on: 2018
Published by: MATHEMATICAL MODELS & METHODS IN APPLIED SCIENCES
Sponsored by: Brazilian National Council for Scientific and Technological Development (CNPq) United States National Institutes of Health (NIH) United States National Science Foundation (NSF)
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative Pseudocode Mathematical description
Authored by: H L Rocha, R C Almeida, E A B F Lima, A C M Resende, J T Oden, T E Yankeelov
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cancer patterns progression Tissue Cell-populations Spheroids Hallmarks Solid stress Signaling pathway Hybrid multiscale model Cell-agent-based model Clinical oncology Kinase cascade

Optimal travel information provision strategies: an agent-based approach under uncertainty
Published on: 2018
Published by: TRANSPORTMETRICA B-TRANSPORT DYNAMICS
Sponsored by: Chinese National Natural Science Foundation United States National Science Foundation (NSF)
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative Flow charts Mathematical description
Authored by: Lei Zhang, Chenfeng Xiong, Zheng Zhu, Xiqun Chen
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Agent-based model behavior Reliability Optimization Network Model Travel behavior time Market penetration Choice User equilibrium Simulation-based optimization Transportation systems Information provision

Safety assessment of a high-rise dormitory in case of fire
Published on: 2018
Published by: INTERNATIONAL JOURNAL OF DISASTER RESILIENCE IN THE BUILT ENVIRONMENT
Sponsored by: Unknown
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative
Authored by: Anass Rahouti, Selim Datoussaid, Thierry Descamps
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Agent-based modelling Evacuation risk management Fire Safety High-rise dormitory

Human impact on the diversity and virulence of the ubiquitous zoonotic parasite Toxoplasma gondii
Published on: 2018
Published by: PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Sponsored by: Chinese National Natural Science Foundation United States National Science Foundation (NSF)
Platforms: NetLogo
Related Files: Code: Paper:
Documentation: Other Narrative Flow charts
Authored by: Xiaopeng Zhao, Chunlei Su, Xing-Quan Zhu, E Keats Shwab, Pooja Saraf, Dong-Hui Zhou, Brent M McFerrin, Daniel Ajzenberg, Gereon Schares, Kenneth Hammond-Aryee, Helden Paul van, Steven A Higgins, Richard W Gerhold, Benjamin M Rosenthal, Jitender P Dubey
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Agent-based model Evolution mathematical modeling Population genetics Toxoplasma gondii Transmission dynamics Mice Genotype Virulence Spatial-distribution Cats Population-genetics Food-habits Pseudokinase rop5 Rural area

The impact of demographic changes, exogenous boosting and new vaccination policies on varicella and herpes zoster in Italy: a modelling and cost-effectiveness study
Published on: 2018
Published by: BMC MEDICINE
Sponsored by: European Union European Research Council (ERC)
Platforms: Unknown
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Documentation: Other Narrative Flow charts Mathematical description
Authored by: Stefano Merler, Piero Poletti, Alessia Melegaro, Caterina Rizzo, Fava Emanuele Del, Valentina Marziano, Marcello Tirani
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Italy individual-based models Epidemiology modelling Demography cost-effectiveness long-term Vaccination immunization Children Efficacy Immunity United-kingdom Older-adults Chickenpox Varicella Herpes zoster Shingles Immunisation Universal vaccination Subunit vaccine

Control measures to prevent the increase of paratuberculosis prevalence in dairy cattle herds: an individual-based modelling approach
Published on: 2018
Published by: VETERINARY RESEARCH
Sponsored by: French National Research Agency (ANR)
Platforms: C++
Related Files: Paper:
Documentation: Other Narrative Flow charts Mathematical description
Authored by: Guillaume Camanes, Alain Joly, Christine Fourichon, Romdhane Racem Ben, Pauline Ezanno
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Dynamics Infection Risk Diagnosis compartmental model transmission Avium subsp paratuberculosis Johnes-disease Economic consequences Control programs Regional-scale

Disease outbreak thresholds emerge from interactions between movement behavior, landscape structure, and epidemiology
Published on: 2018
Published by: PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Sponsored by: United States National Science Foundation (NSF)
Platforms: R
Related Files: Code: Paper:
Documentation: Other Narrative
Authored by: Lauren A White, James D Forester, Meggan E Craft
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Spatial heterogeneity connectivity Management Heterogeneity Landscape fragmentation Animal movement transmission Infectious-diseases Pathogen Persistence Perceptual range Selection functions Disease model Resource selection function Random forests

Cost-effectiveness of a potential Zika vaccine candidate: a case study for Colombia
Published on: 2018
Published by: BMC MEDICINE
Sponsored by: National Science and Engineering Research Council of Canada (NSERC) Brazilian Ministry of Education (CAPES) Canadian Foundation for Innovation
Platforms: Julia
Related Files: Code: Paper:
Documentation: Other Narrative Mathematical description
Authored by: Affan Shoukat, Thomas Vilches, Seyed M Moghadas
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Agent-based modeling Infection cost-effectiveness transmission disease Vaccination Infants Texas America Dengue Update Zika Microcephaly Virus outbreak Birth-defects Pregnancy

Microscale Heterogeneity of the Spatial Distribution of Organic Matter Can Promote Bacterial Biodiversity in Soils: Insights From Computer Simulations
Published on: 2018
Published by: FRONTIERS IN MICROBIOLOGY
Sponsored by: French National Research Agency (ANR) United Kingdom Natural Environment Research Council (NERC)
Platforms: Unknown
Related Files: Paper:
Documentation: ODD Flow charts Mathematical description
Authored by: Xavier Portell, Philippe C Baveye, Valerie Pot, Patricia Garnier, Wilfred Otten
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Agent-based modeling models Dynamics Biodiversity Water Resource allocation carbon bacteria Protocol Lattice-boltzmann Soil Nitrogen Residues Pore scale Organic matter Microbial diversity Microtomography Tortuosity

Estimating the Use of Higher-Order Theory of Mind Using Computational Agents
Published on: 2018
Published by: B E JOURNAL OF THEORETICAL ECONOMICS
Sponsored by: Unknown
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative
Authored by: Rineke Verbrugge, Weerd Harmen de, Denny Diepgrond
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Agent-based modeling behavior Theory of mind Model information Normal-form games Bayesian model selection Matching pennies