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Predicting Population Dynamics from the Properties of Individuals: A Cross-Level Test of Dynamic Energy Budget Theory
Published on: 2013
Published by: AMERICAN NATURALIST
Sponsored by: European Union United States Environmental Protection Agency (EPA) United States National Science Foundation (NSF)
Platforms: NetLogo
Related Files: Code: Paper:
Documentation: ODD Flow charts
Authored by: Volker Grimm, Thomas G Preuss, Roger M Nisbet, Tjalling Jager, Benjamin T Martin
Tags

models growth allocation Daphnia-magna Life-history Reproduction Ecological theory Amplitude cycles Mytilus-edulis-l Deb theory

Integrated Multi-Network Modeling Environment for Spectrum Management
Published on: 2013
Published by: IEEE J SEL AREA COMM
Sponsored by: United States National Science Foundation (NSF)
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative Flow charts
Authored by: Madhav Marathe, Richard Beckman, Karthik Channakeshava, Fei Huang, Junwhan Kim, Achla Marathe, Guanhong Pei, Sudip Saha, Anil Kumar S Vullikanti
Tags

Social networks

A Simulation Optimization Approach to Epidemic Forecasting
Published on: 2013
Published by: PLOS ONE
Sponsored by: United States National Science Foundation (NSF)
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative Flow charts Mathematical description
Authored by: Madhav V Marathe, Elaine O Nsoesie, Richard J Beckman, Sara Shashaani, Kalyani S Nagaraj
Tags

models Network population disease Surveillance Pandemic influenza Seasonal influenza United-states Virus Influenza-a h1n1

Hybrid Modelling of Individual Movement and Collective Behaviour
Published on: 2013
Published by: LECT NOTES MATH
Sponsored by: European Union European Research Council (ERC)
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative Flow charts Mathematical description
Authored by: Benjamin Franz, Radek Erban
Tags

Simulations systems Bacterial chemotaxis Animal groups Tumor-growth Populations Cellular-automaton model Escherichia-coli Equations Pattern-formation

Human mobility patterns predict divergent epidemic dynamics among cities
Published on: 2013
Published by: PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
Sponsored by: National Science and Engineering Research Council of Canada (NSERC) Canadian Institutes of Health Research
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative
Authored by: Benjamin D Dalziel, Babak Pourbohloul, Stephen P Ellner
Tags

Connecting micro dynamics and population distributions in system dynamics models
Published on: 2013
Published by: SYST DYNAM REV
Sponsored by: National Institute of Child Health and Human Development (NICHD) Office of Behavioral and Social Sciences Research (OBSSR)
Platforms: Vensim
Related Files: Code: Paper:
Documentation: Other Narrative Mathematical description
Authored by: Youfa Wang, Hong Xue, Hsin-Jen Chen, Hazhir Rahmandad, Saeideh Fallah-Fini
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Localization of Protein Aggregation in Escherichia coli Is Governed by Diffusion and Nucleoid Macromolecular Crowding Effect
Published on: 2013
Published by: PLOS COMPUTATIONAL BIOLOGY
Sponsored by: French National Research Agency (ANR) French National Institute for Research in Computer Science and Control
Platforms: MATLAB
Related Files: Code: Paper:
Documentation: Other Narrative Mathematical description
Authored by: Hugues Berry, Anne-Sophie Coquel, Jean-Pascal Jacob, Mael Primet, Alice Demarez, Mariella Dimiccoli, Thomas Julou, Lionel Moisan, Ariel B Lindner
Tags

algorithms Inheritance bacteria morphogenesis Quality-control Dna Budding yeast Asymmetric segregation Cell-division Compaction

Scaling up predator-prey dynamics using spatial moment equations
Published on: 2013
Published by: METHODS ECOL EVOL
Sponsored by: French Ministry of Research United Kingdom Natural Environment Research Council (NERC)
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative Mathematical description
Authored by: Frederic Barraquand, David J Murrell
Tags

individual-based models Animal movement Population-dynamics Ecological-systems Pattern-formation Functional-responses Exploitation ecosystems Reaction-diffusion models Encounter rate Search rate

Behind the scenes of population viability modeling: Predicting butterfly metapopulation dynamics under climate change
Published on: 2013
Published by: ECOLOGICAL MODELLING
Sponsored by: National Fund for Scientific Research of Belgium (F.R.S.-FNRS)
Platforms: NetLogo
Related Files: Paper:
Documentation: ODD Flow charts Mathematical description
Authored by: Volker Grimm, Juergen Groeneveld, Viktoriia Radchuk, Karin Johst, Nicolas Schtickzelle
Tags

Conservation pattern Temperature Survival Life-history Individual-based model Lepidoptera New-york Coenonympha-tullia larvae Resource-based habitat

An empirically parameterized individual based model of animal movement, perception, and memory
Published on: 2013
Published by: ECOLOGICAL MODELLING
Sponsored by: National Science and Engineering Research Council of Canada (NSERC)
Platforms: MATLAB
Related Files: Code: Paper:
Documentation: Other Narrative Mathematical description
Authored by: Tal Avgar, Rob Deardon, John M Fryxell
Tags

spatial memory mechanistic model Habitat selection Resource selection functions State-space models Incorporating home-range Ecological landscapes Bayesian-analysis Telemetry data Random-walks