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Intermittent collective dynamics emerge from conflicting imperatives in sheep herds
Published on: 2015
Published by: PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Sponsored by: French National Research Agency (ANR)
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative Mathematical description
Authored by: Guy Theraulaz, Francesco Ginelli, Fernando Peruani, Marie-Helene Pillot, Hugues Chate, Richard Bon
Tags

behavior Decision-Making Predation patterns Animal groups Transition Starling flocks Marine insect Selfish-herd Fish

Transition to farming more likely for small, conservative groups with property rights, but increased productivity is not essential
Published on: 2015
Published by: PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Sponsored by: Unknown
Platforms: C++
Related Files: Paper:
Documentation: Other Narrative
Authored by: Elizabeth M Gallagher, Stephen J Shennan, Mark G Thomas
Tags

Evolution Cooperation Culture health population Origins Domestication Early agriculture Early holocene Plant

AN INDIVIDUAL-BASED MODEL FOR FERAL HOGS IN GREAT SMOKY MOUNTAINS NATIONAL PARK
Published on: 2015
Published by: NAT RESOUR MODEL
Sponsored by: United States National Science Foundation (NSF)
Platforms: C++
Related Files: Paper:
Documentation: ODD Flow charts
Authored by: Suzanne Lenhart, Rene A Salinas, William H Stiver, Joseph L Corn, Charles Collins, Marguerite Madden, Kurt C Vercauteren, Brandon B Schmit, Ellen Kasari, Agricola Odoi, Graham Hickling, Hamish Mccallum
Tags

Protocol Pigs European wild hogs Foods

ANALYSIS OF SENSITIVITY AND UNCERTAINTY IN AN INDIVIDUAL-BASED MODEL OF A THREATENED WILDLIFE SPECIES
Published on: 2015
Published by: NAT RESOUR MODEL
Sponsored by: United States Environmental Protection Agency (EPA)
Platforms: HexSim
Related Files: Paper:
Documentation: Other Narrative
Authored by: Bruce G Marcot, Peter H Singleton, Nathan H Schumaker
Tags

Viability Landscape calibration Conservation Dispersal Population-dynamics Parameters Northern spotted owls Barred owl Patch size

Comparison of individual-based modeling and population approaches for prediction of foodborne pathogens growth
Published on: 2015
Published by: FOOD MICROBIOLOGY
Sponsored by: French National Research Agency (ANR)
Platforms: MATLAB
Related Files: Paper:
Documentation: Other Narrative Mathematical description
Authored by: Jean-Christophe Augustin, Rachel Ferrier, Bernard Hezard, Adrienne Lintz, Valerie Stahl
Tags

Cells Variability Temperature Food Listeria-monocytogenes Quantitative risk-assessment Lag time distributions Cold-smoked salmon Water activity Soft cheese

An individual-based modeling approach to simulate the effects of cellular nutrient competition on Escherichia coli K-12 MG1655 colony behavior and interactions in aerobic structured food systems
Published on: 2015
Published by: FOOD MICROBIOLOGY
Sponsored by: Flanders Research Foundation
Platforms: Repast Java
Related Files: Paper:
Documentation: ODD Mathematical description
Authored by: Ignace L M M Tack, Filip Logist, Estefania Noriega Fernandez, Impe Jan F M Van
Tags

Metabolism initiation Bacterial Colonies Cycle Growth-rate Division Dna-replication Cultures Phase B/r

Spatiotemporal variation in flow-dependent recruitment of long-lived riverine fish: Model development and evaluation
Published on: 2015
Published by: ECOLOGICAL MODELLING
Sponsored by: Unknown
Platforms: Unknown
Related Files: Paper:
Documentation: ODD Mathematical description
Authored by: Valery E Forbes, Daisuke Coto, Martin J Hamel, Jeremy J Hammen, Matthew L Rugg, Mark A Pegg
Tags

Individual-based model Atlantic salmon Climate-change Life-history characteristics Lower missouri river Shovelnose sturgeon Scaphirhynchus sturgeon Mississippi river Pallid sturgeon Abiotic factors

Evolution of dispersal distance: Maternal investment leads to bimodal dispersal kernels
Published on: 2015
Published by: Journal of Theoretical Biology
Sponsored by: European Science Foundation European Union Austrian Science Fund (FWF)
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative Mathematical description
Authored by: Hans Joachim Poethke, Emanuel A Fronhofer, Ulf Dieckmann
Tags

Competition ecology Seed dispersal Density Consequences Trade-offs Plants Dependent dispersal Achene dimorphism Spatial scales

Effects of temperature and surface water availability on spatiotemporal dynamics of stream salamanders using pattern-oriented modelling
Published on: 2015
Published by: ECOLOGICAL MODELLING
Sponsored by: Unknown
Platforms: Unknown
Related Files: Paper:
Documentation: ODD Flow charts
Authored by: Lael Parrott, Philippe Girard, Charles-Andre Caron, David M Green
Tags

habitat Size Life-history Desmognathus-ochrophaeus Amphibian metamorphosis Larval growth Gyrinophilus-porphyriticus Plethodontid salamanders Embryonic-development Genus desmognathus

Demographic stochasticity alters the outcome of exploitation competition
Published on: 2015
Published by: Journal of Theoretical Biology
Sponsored by: Ministry of Science and Technology of Taiwan
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative Mathematical description
Authored by: Toshinori Okuyama
Tags

Coexistence systems Phytoplankton Environments Coupled chemical-reactions Consumers Exclusion Species-diversity Armstrong Mcgehee