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Ecosystem indicators-accounting for variability in species' trophic levels
Published on: 2017
Published by: ICES JOURNAL OF MARINE SCIENCE
Sponsored by: French Foundation for Research on Biodiversity (FRB)
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative Mathematical description
Authored by: Yunne-Jai Shin, Caihong Fu, Philippe Verley, Jodie Reed, Lynne Shannon, Laure Velez, Ekin Akoglu, Alida Bundy, Marta Coll, Elizabeth A Fulton, Arnaud Gruss, Ghassen Halouani, Johanna J Heymans, Jennifer E Houle, Emma John, Loc'h Francois Le, Baris Salihoglu
Tags

Individual-based model Management fisheries Marine ecosystems Food-web dynamics Southern benguela ecosystem Trophodynamic indicators Ecological indicators Fish community Size-spectra Ecosystem indicators ecosystem models Fishing effects Fishing scenarios Trophic level-based indicators

Use of Bayesian analysis with individual-based modeling to project outcomes of coral restoration
Published on: 2017
Published by: RESTORATION ECOLOGY
Sponsored by: Department of Science and Technology of the Republic of the Philippines
Platforms: NetLogo
Related Files: Paper:
Documentation: Other Narrative Flow charts Mathematical description
Authored by: Caryl S Benjamin, Andalus T Punongbayan, Cruz Dexter W dela, Ronald D Villanueva, Maria Vanessa B Baria, Helen T Yap
Tags

Simulation Diversity Validation Community ecology sensitivity growth Transplantation Complex-systems Reef-building corals Acropora Coral community trajectory Pulse anthropogenic disturbance Stochastic uncertainty

Multiobjective synthesis of robust vaccination policies
Published on: 2017
Published by: APPLIED SOFT COMPUTING
Sponsored by: Brazilian Ministry of Education (CAPES) Brazilian National Council for Scientific and Technological Development (CNPq)
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative Pseudocode Mathematical description
Authored by: Cruz Andre R da, Rodrigo T N Cardoso, Ricardo H C Takahashi
Tags

Genetic Algorithms algorithms Optimization Strategies Diseases Sir epidemic model Multiobjective optimization Vaccination planning Robust synthesis Epidemics control

Evaluating factors affecting restoration of an endangered marine broadcast-spawning invertebrate using an individual-based model of white abalone
Published on: 2017
Published by: ENDANGERED SPECIES RESEARCH
Sponsored by: California Department of Fish and Wildlife
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative Flow charts Mathematical description
Authored by: Yan Li, Laura Rogers-Bennett
Tags

Individual-based model Spatial structure poaching Climate-change Population-dynamics Fertilization success Fisheries management Restoration Haliotis-sorenseni Red abalone Southern-california Northern california Natural mortality Habitat spatial structure Population spatial structure Ocean warming Haliotis sorenseni

Variation in foraging success among predators and its implications for population dynamics
Published on: 2017
Published by: ECOLOGY AND EVOLUTION
Sponsored by: Ministry of Science and Technology of Taiwan
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative Mathematical description
Authored by: Toshinori Okuyama
Tags

Individual-based model Efficiency Prey Consumption Functional-response experiments Mutual interference Egg limitation Spiders Individual variation Functional response Numerical response

Fishing-induced changes in adult length are mediated by skipped-spawning
Published on: 2017
Published by: ECOL APPL
Sponsored by: Ministry of Science and Technology of Taiwan
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative
Authored by: Hui-Yu Wang, Ying-Shiuan Chen, Chien-Chung Hsu, Sheng-Feng Shen
Tags

fisheries Cod gadus-morhua North pacific Life-history evolution Biphasic growth Pacific bluefin tuna Induced disruptive selection Dependent energy allocation Age-structure Thunnus-orientalis Fishing-induced evolution Adult demography Eco-genetic individual-based modeling Fisheries selectivity Life history trade-offs Pacific bluefin tuna Thunnus orientalis

Sexual selection can both increase and decrease extinction probability: reconciling demographic and evolutionary factors
Published on: 2017
Published by: J ANIM ECOL
Sponsored by: Unknown
Platforms: R
Related Files: Code: Paper:
Documentation: Other Narrative
Authored by: Carlos Martinez-Ruiz, Robert J Knell
Tags

Individual-based model Adaptation Climate change Evolution Diversity sexual selection conflict Risk population preferences Mate Choice Extinction Genetic-variation Red deer Lek paradox Environmental change

Directed dispersal by an abiotic vector: wetland plants disperse their seeds selectively to suitable sites along the hydrological gradient via water
Published on: 2017
Published by: FUNCTIONAL ECOLOGY
Sponsored by: European Union Netherlands Organization for Scientific Research (NWO)
Platforms: MATLAB
Related Files: Paper:
Documentation: Other Narrative Mathematical description
Authored by: Merel B Soons, Groot G Arjen de, Ramirez M Teresa Cuesta, Rob G A Fraaije, Jos T A Verhoeven, Jager Monique de
Tags

Biodiversity Habitat fragmentation Movement ecology Long-distance dispersal Determinants Forest Colonization Communities Life-history traits Seed dispersal Vegetation patterns Wind dispersal Hydrochory Riparian zones Hydrological niche Anemochory Evolutionary adaptations Plant functional traits Water dispersal

Neutral aggregation in finite-length genotype space
Published on: 2017
Published by: PHYSICAL REVIEW E
Sponsored by: Unknown
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative Mathematical description
Authored by: Bahram Houchmandzadeh
Tags

models population Estimating evolutionary rates Substitutions Number

Effects of dispersal and selection on stochastic assembly in microbial communities
Published on: 2017
Published by: ISME JOURNAL
Sponsored by: United States Department of Energy (DOE) United States National Science Foundation (NSF)
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative
Authored by: Sarah Evans, Jennifer B H Martiny, Steven D Allison
Tags

ecology patterns biogeography microorganisms Disturbance Tests Local species-diversity Litter decomposition Metacommunities Immigration