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Analysis and IbM simulation of the stages in bacterial lag phase: Basis for an updated definition
Published on: 2008
Published by: Journal of Theoretical Biology
Sponsored by: The Generalitat de Catalunya European Social Fund Spanish Ministries
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative Mathematical description
Authored by: Jordi Ferrer, Clara Prats, Daniel Lopez, Josep Vives-Rego, Antoni Giro
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Model growth Division Listeria-monocytogenes Cultures Cellular-automaton approach Microbial lag

Gyro-scope: An individual-based computer model to forecast gyrodactylid infections on fish hosts
Published on: 2008
Published by: INT J PARASITOL
Sponsored by: European Union United Kingdom Natural Environment Research Council (NERC)
Platforms: C#
Related Files: Paper:
Documentation: Other Narrative
Authored by: Oosterhout C van, R Potter, H Wright, J Cable
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selection Atlantic salmon Parasites Female choice Guppies poecilia-reticulata 2 wild populations Acquired-resistance Turnbulli Monogenea Bullatarudis

A fully continuous individual-based model of tumor cell evolution
Published on: 2008
Published by: CR BIOL
Sponsored by: Unknown
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative Mathematical description
Authored by: Glenn F Webb, Pablo Gomez-Mourelo, Eva Sanchez, Luis Casasus
Tags

systems Aggregation invasion Equations Limit dynamics Derivation

New estimates of lethality of sea lamprey (Petromyzon marinus) attacks on lake trout (Salvelinus namaycush): implications for fisheries management
Published on: 2008
Published by: CAN J FISH AQUAT SCI
Sponsored by: United States Geological Survey (USGS)
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative Mathematical description
Authored by: Charles P Madenjian, Brian D Chipman, J Ellen Marsden
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Dynamics Predation Community Model Consumption Survival Food-web Ontario Great-lakes Parasitic-phase

Invited views in basic and applied ecology - Intraguild predation with spatially structured interactions
Published on: 2008
Published by: BASIC AND APPLIED ECOLOGY
Sponsored by: Unknown
Platforms: NetLogo
Related Files: Paper:
Documentation: Other Narrative Mathematical description
Authored by: Toshinorl Okuyama
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Dynamics Productivity Coexistence population Enrichment Food webs Alternative prey Omnivory Competitors Arthropods

A coupled plankton-anchovy population dynamics model assessing nonlinear controls of anchovy and gelatinous biomass in the Black Sea
Published on: 2008
Published by: MARINE ECOLOGY PROGRESS SERIES
Sponsored by: European Union Turkish Scientific and Technical Research Council (TUBITAK)
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative Flow charts Mathematical description
Authored by: Temel Oguz, Baris Salihoglu, Bettina Fach
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Individual-based model Sensitivity-analysis Engraulis-encrasicolus l. Early-life-history Chesapeake bay Intraguild predation Ctenophore mnemiopsis Fish abundance Reproductive characteristics Mediterranean basin

Importance of temperature in modeling food web bioaccumulation in large aquatic systems
Published on: 2008
Published by: ECOLOGICAL MODELLING
Sponsored by: United States Environmental Protection Agency (EPA)
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative Flow charts Mathematical description
Authored by: Xin Zhang, Jr Russell G Kreis
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Individual-based model contamination Ecosystem Consumption Chain Alosa-pseudoharengus Trout salvelinus-namaycush Michigan lake trout Pcbs Energetics

Comparisons between Consumption Estimates from Bioenergetics Simulations and Field Measurements for Walleyes from Oneida Lake, New York
Published on: 2008
Published by: T AM FISH SOC
Sponsored by: Electric Power Research Institute (EPRI)
Platforms: Statistical Analysis Software (SAS)
Related Files: Paper:
Documentation: Other Narrative Mathematical description
Authored by: Lars G Rudstam, Brian F Lantry, John L Forney, Anthony J VanDeValk, Edward L Mills, Donald J Stewart, Jean V Adams
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Individual-based model Stizostedion-vitreum-vitreum Yellow perch Food-consumption Dreissena-polymorpha Perch perca-fluviatilis The-year walleye Laboratory evaluation Systematic-error Micropterus-salmoides

A numerical investigation of the impact of turbulence on the feeding rates of Oithona davisae
Published on: 2008
Published by: J MARINE SYST
Sponsored by: Unknown
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative Mathematical description
Authored by: Maurizio Ribera d'Alcala, Patrizio Mariani, Vincenzo Botte
Tags

Simulation plankton Environments Small-scale turbulence Contact rates Flow-field Copepod Homogeneous isotropic turbulence Encounter rates Calm

Beyond the Keller-Segel model
Published on: 2008
Published by: EUR PHYS J-SPEC TOP
Sponsored by: Unknown
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative Mathematical description
Authored by: P Romanczuk, U Erdmann, H Engel, L Schimansky-Geier
Tags

Dynamics patterns Bacterial chemotaxis microorganisms sensitivity Colonies Motion Active brownian particles