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A new hypothesis concerning the nature of small pelagic fish clusters An individual-based modelling study of Sardinella aurita dynamics off West Africa
Published on: 2009
Published by: ECOLOGICAL MODELLING
Sponsored by: Unknown
Platforms: Unknown
Related Files: Paper:
Documentation: ODD Flow charts
Authored by: Fur Jean Le, Patrick Simon
Tags

pattern systems Ecosystem Recruitment Life-history Ecological theory Southern benguela Anchovy engraulis-capensis Emergent properties Schooling behavior

Exploring the effect of Marine Protected Areas on the dynamics of fish communities in the southern Benguela: an individual-based modelling approach
Published on: 2009
Published by: ICES JOURNAL OF MARINE SCIENCE
Sponsored by: South African National Research Foundation (NRF)
Platforms: Java OSMOSE
Related Files: Paper:
Documentation: Other Narrative Flow charts
Authored by: Yunne-Jai Shin, John G Field, Dawit Yemane
Tags

Uncertainty Simulations Conservation Ecosystem Impacts Indicators Fisheries management Reserves Species interactions Size-spectra

An individual-based population dynamic model for estimating biomass yield and nutrient fluxes through an off-shore mussel (Mytilus galloprovincialis) farm
Published on: 2009
Published by: ESTUARINE COASTAL AND SHELF SCIENCE
Sponsored by: European Union
Platforms: MATLAB
Related Files: Paper:
Documentation: Other Narrative Mathematical description
Authored by: Daniele Brigolin, Roberto Pastres, Maschio Gabriele Dal, Federico Rampazzo, Michele Giani
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growth Adriatic sea Carrying-capacity Food availability Mediterranean mussel Tapes-philippinarum Suspension-feeders Nitrogen dynamics Mollusca-bivalvia Edulis-l

Population-level effect of potential HSV2 prophylactic vaccines on HIV incidence in sub-Saharan Africa
Published on: 2009
Published by: VACCINE
Sponsored by: Wellcome Trust
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative
Authored by: Esther E Freeman, Richard G White, Roe Bakker, Kate K Orroth, Helen A Weiss, Anne Buve, Richard J Hayes, Judith R Glynn
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Women Male circumcision Human-immunodeficiency-virus Herpes-simplex-virus Sexually-transmitted infections Placebo-controlled trial Genital herpes Double-blind Sex workers Type-2

Small pelagic fish reproductive strategies in upwelling systems: A natal homing evolutionary model to study environmental constraints
Published on: 2009
Published by: PROG OCEANOGR
Sponsored by: European Union
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative
Authored by: Christophe Lett, P Freon, C Mullon, T Brochier, F Colas, V Echevin, L A Cubillos, J Tam, M Chlaida
Tags

Marine fish Individual-based model Cod gadus-morhua California current system Anchoveta engraulis-ringens Sardine strangomera-bentincki 1997-1998 el-nino Upwelling region Eastern boundary Northwest africa

Simulation of the vegetation structure and function in a Malaysian tropical rain forest using the individual-based dynamic vegetation model SEIB-DGVM
Published on: 2009
Published by: FOREST ECOL MANAG
Sponsored by: Unknown
Platforms: Fortran SEIB-DGVM
Related Files: Code: Paper:
Documentation: Other Narrative
Authored by: Hisashi Sato
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Climate Ecosystem growth Impacts Space Co2 Gap models

Projecting population trends of endangered amphibian species in the face of uncertainty: A pattern-oriented approach
Published on: 2009
Published by: ECOLOGICAL MODELLING
Sponsored by: Unknown
Platforms: Unknown
Related Files: Paper:
Documentation: ODD Flow charts
Authored by: William E Grant, Todd M Swanack, Michael R J Forstner
Tags

models Dynamics ecology Dispersal Mortality Persistence Toad bufo-houstonensis Breeding amphibians Declines Calamita

Modelling of Atlantic salmon (Salmo salar L.) behaviour in sea-cages: A Lagrangian approach
Published on: 2009
Published by: AQUACULTURE
Sponsored by: Unknown
Platforms: Java
Related Files: Paper:
Documentation: ODD Flow charts Mathematical description
Authored by: Martin Fore, Tim Dempster, Jo Arve Alfredsen, Vegar Johansen, David Johansson
Tags

Light growth Density Temperature Fish schools Swimming behavior Depth Physiology Welfare

Effects of temperature, food availability, and body size on daily growth rate of Japanese anchovy Engraulis japonicus larvae in Hiuchi-nada
Published on: 2009
Published by: FISHERIES SCI
Sponsored by: Unknown
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative Mathematical description
Authored by: Youichi Tsukamoto, Hiromu Zenitani, Naoaki Kono, Reiji Masuda
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Model Population-dynamics Herring clupea-harengus Waters Seto inland sea Sardinops-melanostictus Copepod Otolith Increments Deposition

Modelling the effect of in-stream and overland dispersal on gene flow in river networks
Published on: 2009
Published by: ECOLOGICAL MODELLING
Sponsored by: Unknown
Platforms: R
Related Files: Paper:
Documentation: Other Narrative
Authored by: A Chaput-Bardy, C Fleurant, C Lemaire, J Secondi
Tags

connectivity Risk ecology patterns Australia Population-dynamics Consequences History Fresh-water fish Adult aquatic insects