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Rule-based simulation of temperate bacteriophage infection: Restriction-modification as a limiter to infection in bacterial populations
Published on: 2010
Published by: BIOSYSTEMS
Sponsored by: Biotechnology and Biological Sciences Research Council
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative Flow charts
Authored by: R Gregory, J R Saunders, V A Saunders
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Evolution ecology Escherichia-coli Dna Cultures Host-controlled modification Phage-lambda Microbial interactions Specificity Lysogens

Restoration thinning accelerates structural development and carbon sequestration in an endangered Australian ecosystem
Published on: 2010
Published by: JOURNAL OF APPLIED ECOLOGY
Sponsored by: Australian Research Council (ARC)
Platforms: R
Related Files: Paper:
Documentation: Other Narrative Flow charts
Authored by: Yvonne M Buckley, John M Dwyer, Rod Fensham
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Competition Decomposition Forest Plants Species hypericum-perforatum Pine-bunchgrass ecosystem Ecological restoration Stand dynamics Ponderosa Brigalow

Dense and sparse aggregations in complex motion: Video coupled with simulation modeling
Published on: 2010
Published by: ECOL COMPLEX
Sponsored by: United States Environmental Protection Agency (EPA) United States National Science Foundation (NSF) Cooperative Agreement
Platforms: C#
Related Files: Paper:
Documentation: Other Narrative Pseudocode
Authored by: Paula Federico, Dobromir T Dimitrov, Gary F McCracken, Thomas G Hallam, Aruna Raghavan, Haritha Kolli, Hairong Qi, Margrit Betke, John K Westbrook, Kimberly Kennard, Thomas H Kunz
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Free-tailed bats Dietary variation

Individual Competition and the Emergence of Density-Dependent Exposure to Predation: How Behaviors Influence Population Processes
Published on: 2010
Published by: ADAPT BEHAV
Sponsored by: Unknown
Platforms: Unknown
Related Files: Paper:
Documentation: ODD
Authored by: J Hsuan Lammers, Kevin Warburton, Bronwen W Cribb
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Mortality Prey Choice Size Persistence Fresh-water prawn Macrobrachium-australiense Fish predators Stream fish Antipredator

Detecting interspecific macroparasite interactions from ecological data: patterns and process
Published on: 2010
Published by: ECOL LETT
Sponsored by: Leverhulme Trust Wellcome Trust United Kingdom Natural Environment Research Council (NERC)
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative Flow charts Mathematical description
Authored by: Andy Fenton, Mark E Viney, Jo Lello
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Malaria Aggregation Community structure Immune-responses Species cooccurrence Intestinal parasites Schistosoma-mansoni Mixed models Null models Helminth

Measures, perceptions and scaling patterns of aggregated species distributions
Published on: 2010
Published by: ECOGRAPHY
Sponsored by: Unknown
Platforms: Mathematica
Related Files: Code: Paper:
Documentation: Other Narrative
Authored by: Cang Hui, Ruan Veldtman, Melodie A McGeoch
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Diversity ecology Mortality Power-law Association Dependence Occupancy Abundance Self-similarity Multiple spatial scales

Simulation study of the vegetation structure and function in eastern Siberian larch forests using the individual-based vegetation model SEIB-DGVM
Published on: 2010
Published by: FOREST ECOL MANAG
Sponsored by: Japanese Society for the Promotion of Science
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative Mathematical description
Authored by: Hisashi Sato, Hideki Kobayashi, Nicolas Delbart
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Productivity ecosystems biomass Water Exchanges Radiation Carbon-dioxide Continuous permafrost region Terrestrial biosphere model Taiga

Simple predator-prey swarming model
Published on: 2010
Published by: PHYSICAL REVIEW E
Sponsored by: Unknown
Platforms: Unknown
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Documentation: Other Narrative
Authored by: Vladimir Zhdankin, J C Sprott
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Dynamics Schools systems flocking Motion

Spatial-temporal transmission of influenza and its health risks in an urbanized area
Published on: 2010
Published by: COMPUTERS ENVIRONMENT AND URBAN SYSTEMS
Sponsored by: Unknown
Platforms: Unknown
Related Files: Paper:
Documentation: UML Other Narrative
Authored by: Liang Mao, Ling Bian
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Dynamics networks Model smallpox Epidemic Pandemic influenza Strategies United-states Spread Infectious-disease transmission

SELF-PROPELLED INTERACTING PARTICLE SYSTEMS WITH ROOSTING FORCE
Published on: 2010
Published by: MATHEMATICAL MODELS & METHODS IN APPLIED SCIENCES
Sponsored by: German Research Foundation (Deutsche Forschungsgemeinschaft, DFG) The Generalitat de Catalunya
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative Mathematical description
Authored by: Josa A Carrillo, Axel Klar, Stephan Martin, Sudarshan Tiwari
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Dynamics Model flocking Aggregation Animal groups Fish schools Distance Driven particles Continuum-limit Potentials