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Pattern-oriented modeling of bird foraging and pest control in coffee farms
Published on: 2011
Published by: ECOLOGICAL MODELLING
Sponsored by: United States National Science Foundation (NSF)
Platforms: NetLogo
Related Files: Paper:
Documentation: ODD Flow charts
Authored by: Steven F Railsback, Matthew D Johnson
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Individual-based model Conservation Habitats Services Functional-response Tests Hypothenemus-hampei coleoptera Berry borer Farmland bird Scolytidae

Integrating effects of supplementary feeding, poisoning, pollutant ingestion and wind farms of two vulture species in Spain using a population viability analysis
Published on: 2011
Published by: JOURNAL OF ORNITHOLOGY
Sponsored by: Spanish Ministries
Platforms: Vortex STATISTICA
Related Files: Paper:
Documentation: Other Narrative Mathematical description
Authored by: Pascual Lopez-Lopez, Clara Garcia-Ripolles
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Conservation birds Impacts Survival Food Gyps-fulvus Egyptian vultures Power-plants Diclofenac Residues

Priority resource access mediates competitive intensity between an invasive weevil and native floral herbivores
Published on: 2011
Published by: BIOL INVASIONS
Sponsored by: United States National Science Foundation (NSF)
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative
Authored by: S M Louda, T A Rand, A A R Kula, A E Arnett, N M West, B Tenhumberg
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Interspecific interactions Curculionidae Biological-control agents Cirsium-canescens Phytophagous insects Platte thistle Ecological risk Host-plant Biocontrol Tephritidae

Regional distribution of genetically modified organisms (GMOs)-Up-scaling the dispersal and persistence potential of herbicide resistant oilseed rape (Brassisca napus)
Published on: 2011
Published by: ECOL INDIC
Sponsored by: European Union German Federal Ministry of Education and Research (BMBF)
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative
Authored by: Broder Breckling, Hauke Reuter, Gunther Schmidt, Winfried Schroeder, Ulrike Middelhoff, Hendrik Pehlke
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models Populations Crops Risk-assessment Pollen Seed Cropping system National-scale Gene escape Volunteer

Effects of local interaction and dispersal on the dynamics of size-structured populations
Published on: 2011
Published by: ECOLOGICAL MODELLING
Sponsored by: United Kingdom Engineering and Physical Sciences Research Council (EPSRC)
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative Flow charts Mathematical description
Authored by: Thomas Adams, Graeme Ackland, Glenn Marion, Colin Edwards
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Competition models growth Plant-communities Forest dynamics Species-diversity Trees Stand structure Spatial-pattern Moment equations

An integration of habitat evaluation, individual based modeling, and graph theory for a potential black bear population recovery in southeastern Texas, USA
Published on: 2011
Published by: LANDSCAPE ECOLOGY
Sponsored by: United States National Aeronautics and Space Administration (NASA) National Fish and Wildlife Foundation Unied States tNational Park Service
Platforms: LANDGRAPHS
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Documentation: Other Narrative Mathematical description
Authored by: Jianguo Liu, Anita T Morzillo, Joseph R Ferrari
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movements Landscape connectivity Conservation Dispersal Heterogeneous landscapes Forest Florida

Limited interactions in flocks: relating model simulations to empirical data
Published on: 2011
Published by: JOURNAL OF THE ROYAL SOCIETY INTERFACE
Sponsored by: United Kingdom Natural Environment Research Council (NERC)
Platforms: Unknown
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Documentation: Other Narrative Mathematical description
Authored by: A Jamie Wood, Nikolai W F Bode, Daniel W Franks
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Collective animal behavior

Deterministic epidemic models on contact networks: Correlations and unbiological terms
Published on: 2011
Published by: THEORETICAL POPULATION BIOLOGY
Sponsored by: Unknown
Platforms: MATLAB
Related Files: Code: Paper:
Documentation: Other Narrative Mathematical description
Authored by: Kieran J Sharkey
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behavior Population-dynamics Space Spread Individuals Level Statistical-mechanics Superposition approximation Disease dynamics

Individual-based modelling of adaptation in marine microbial populations using genetically defined physiological parameters
Published on: 2011
Published by: ECOLOGICAL MODELLING
Sponsored by: Unknown
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative Flow charts Mathematical description
Authored by: James R Clark, Stuart J Daines, Timothy M Lenton, Andrew J Watson, Hywel T P Williams
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Competition ecosystems kinetics Phytoplankton cell quota model Ocean Continuous culture Monochrysis-lutheri droop Plankton functional types Nutrient-uptake

iDynoMiCS: next-generation individual-based modelling of biofilms
Published on: 2011
Published by: ENVIRONMENTAL MICROBIOLOGY
Sponsored by: European Union German Research Foundation (Deutsche Forschungsgemeinschaft, DFG) Helmholtz Association of German Research Centres (Helmholtz-Gemeinschaft Deutscher Forschungszentren HGF)
Platforms: iDynoMiCS (standingfor individual-based Dynamics of Microbial CommunitiesSimulator)
Related Files: Paper:
Documentation: ODD Pseudocode Mathematical description
Authored by: Jan-Ulrich Kreft, Cristian Picioreanu, Laurent A Lardon, Brian V Merkey, Sonia Martins, Andreas Doetsch, Barth F Smets
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Simulation continuum model bacteria growth Denitrification Community structure Detachment Membrane-aerated biofilm Microbial biofilms Continuous-culture