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Bivalve condition index as an indicator of aquaculture intensity: A meta-analysis
Published on: 2013
Published by: ECOL INDIC
Sponsored by: Fisheries and Oceans Canada (DFO) Prince Edward Island Aquaculture Alliance (PEIAA)
Platforms: R
Related Files: Code: Paper:
Documentation: Other Narrative Mathematical description
Authored by: R Filgueira, L A Comeau, T Landry, J Grant, T Guyondet, A Mallet
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New-zealand Oyster crassostrea-gigas Mussels mytilus-edulis Prince-edward-island Pacific oyster Environmental parameters Sustainable management Reproductive condition Phytoplankton biomass Perna-canaliculus

Targeted versus universal screening and decolonization to reduce healthcare-associated meticillin-resistant Staphylococcus aureus infection
Published on: 2013
Published by: JOURNAL OF HOSPITAL INFECTION
Sponsored by: European Union Wellcome Trust Oak Foundation
Platforms: C++
Related Files: Paper:
Documentation: ODD Mathematical description
Authored by: S R Deeny, B S Cooper, B Cookson, S Hopkins, J V Robotham
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Duration Carriage Risk-factors

Interventions for avian influenza A (H5N1) risk management in live bird market networks
Published on: 2013
Published by: PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Sponsored by: Bloomsbury Consortium University of London Central Research
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative Mathematical description
Authored by: Guillaume Fournie, Javier Guitian, Stephanie Desvaux, Chi Cuong Vu, Huu Dung Do, Dirk Udo Pfeiffer, Punam Mangtani, Azra C Ghani
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Infection Vietnam Surveillance Great-britain Hong-kong Bangladesh Poultry markets Movement networks Virus h5n1 Chickens

Understanding the Mechanisms of Collective Decision Making in Ecological Restoration: An Agent-Based Model of Actors and Organizations
Published on: 2013
Published by: ECOLOGY AND SOCIETY
Sponsored by: United States National Science Foundation (NSF)
Platforms: NetLogo
Related Files: Code: Paper:
Documentation: ODD Flow charts
Authored by: Moira L Zellner, Cristy Watkins, Dean Massey, Jeremy Brooks, Kristen Ross
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Agent-based modeling Chicago Wilderness collective decision making ecological restoration

Responses of European anchovy vital rates and population growth to environmental fluctuations: An individual-based modeling approach
Published on: 2013
Published by: ECOLOGICAL MODELLING
Sponsored by: French National Research Agency (ANR)
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative Flow charts Mathematical description
Authored by: H Pethybridge, D Roos, V Loizeau, L Pecquerie, C Bacher
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Phytoplankton Sensitivity-analysis Life-history Dynamics model Small pelagic fish Engraulis-encrasicolus-l. Larval growth Western mediterranean-sea Daily egg-production Cadiz sw spain

What mark variograms tell about spatial plant interactions
Published on: 2013
Published by: ECOLOGICAL MODELLING
Sponsored by: Swedish Research Council Swedish Foundation for Strategic Research
Platforms: R
Related Files: Paper:
Documentation: Other Narrative Mathematical description
Authored by: Arne Pommerening, Aila Sarkka
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Competition Model growth Forest Size Trees Point process statistics Stand structure

A new interaction potential for swarming models
Published on: 2013
Published by: PHYSICA D-NONLINEAR PHENOMENA
Sponsored by: Generalitat de Catalunya Royal Society United Kingdom Engineering and Physical Sciences Research Council (EPSRC)
Platforms: Unknown
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Documentation: Other Narrative Mathematical description
Authored by: S Martin, Josa A Carrillo, V Panferov
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Dynamics Aggregation Animal groups System Fish schools Distance Equations Self-driven particles Continuum-limit Stationary states

Extrapolating ecotoxicological effects from individuals to populations: a generic approach based on Dynamic Energy Budget theory and individual-based modeling
Published on: 2013
Published by: ECOTOXICOLOGY
Sponsored by: European Union United States Environmental Protection Agency (EPA) United States National Science Foundation (NSF)
Platforms: NetLogo
Related Files: Paper:
Documentation: ODD Mathematical description
Authored by: Volker Grimm, Thomas G Preuss, Roger M Nisbet, Tjalling Jager, Monika Hammers-Wirtz, Benjamin T Martin
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Mechanistic effect models Protocol Chemicals Parameters Daphnia-magna End-points Life-cycle Ecological risk-assessment Toxicity 3,4-dichloroaniline

Coupling of an individual-based model of anchovy with lower trophic level and hydrodynamic models
Published on: 2013
Published by: J OCEAN U CHINA
Sponsored by: Chinese National Natural Science Foundation National Basic Research Program of China
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative Flow charts Mathematical description
Authored by: Hao Wei, Yuheng Wang, Michio J Kishi
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Habitat use Ecosystem Population-dynamics North pacific Sea

Plant Interactions Alter the Predictions of Metabolic Scaling Theory
Published on: 2013
Published by: PLOS ONE
Sponsored by: Initiative and Networking Fund of the Helmholtz Association (NRB)
Platforms: NetLogo
Related Files: Code: Paper:
Documentation: ODD Mathematical description
Authored by: Volker Grimm, Uta Berger, Yue Lin, Franka Huth, Jacob Weiner
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Competition models growth Populations Allometry General quantitative theory Tree-dominated communities Density relationships Size symmetry Mass-density