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Densities of Ecological Replacement Herbivores Required to Restore Plant Communities: A Case Study of Giant Tortoises on Pinta Island, Galapagos
Published on: 2014
Published by: RESTORATION ECOLOGY
Sponsored by: Galapagos Conservancy
Platforms: NetLogo
Related Files: Code: Paper:
Documentation: ODD
Authored by: Elizabeth A Hunter, James P Gibbs
Tags

Dynamics ecosystems Conservation Savanna Grasslands Protocol Grazing systems 21st-century Vegetation Engineers

Modeling turbidity type and intensity effects on the growth and starvation mortality of age-0 yellow perch
Published on: 2014
Published by: CAN J FISH AQUAT SCI
Sponsored by: United States Geological Survey (USGS) United States National Science Foundation (NSF) Great Lakes Fishery Commission
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative Flow charts Mathematical description
Authored by: Nathan F Manning, Jonathan M Bossenbroek, Christine M Mayer, David B Bunnell, Jeff T Tyson, Lars G Rudstam, James R Jackson
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Individual-based model Land-use harmful algal blooms Laurentian great-lakes Western lake-erie Size-dependent predation Mussels dreissena-polymorpha Ontogenic niche shifts Oneida lake Largemouth bass

The role of belowground competition and plastic biomass allocation in altering plant mass-density relationships
Published on: 2014
Published by: OIKOS
Sponsored by: Initiative and Networking Fund of the Helmholtz Association (NRB)
Platforms: NetLogo
Related Files: Paper:
Documentation: ODD Mathematical description
Authored by: Volker Grimm, Uta Berger, Yue Lin, Franka Huth
Tags

Light Populations Communities General-model Symmetry Asymmetric competition Allometry Root competition Size asymmetry Tree growth

The growth of larval cod and haddock in the Irish Sea: a model with temperature, prey size and turbulence forcing
Published on: 2014
Published by: FISH OCEANOGR
Sponsored by: Department for Environment Food & Rural Affairs (DEFRA)
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative Flow charts Mathematical description
Authored by: Sophie G Pitois, Mike Armstrong
Tags

Marine fish Atlantic cod North-sea Small-scale turbulence Georges-bank Early-life stages Melanogrammus-aeglefinus Whiting merlangius-merlangus Gadus-morhua growth Encounter rates

Modeling the impact of climate variability on Black Sea anchovy recruitment and production
Published on: 2014
Published by: FISH OCEANOGR
Sponsored by: European Union
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative
Authored by: Ceren Guraslan, Bettina A Fach, Temel Oguz
Tags

Individual-based model Sardine sardina-pilchardus Oyashio transitional waters Engraulis-encrasicolus l. Population-dynamics model Small pelagic fish Long-term changes Japanese anchovy Environmental variability Mediterranean-sea

Investigating and modelling the morphological plasticity of weeds
Published on: 2014
Published by: FIELD CROP RES
Sponsored by: French National Research Agency (ANR) Environment and Agronomy Department (INRA) Region of Burgundy
Platforms: VISILOG
Related Files: Paper:
Documentation: Other Narrative Mathematical description
Authored by: Nathalie Colbach, Alban Collard, Sebastien H M Guyot, Nicolas M Munier-Jolain, Hugues Busset
Tags

Competition growth Simulation-model Population-dynamics Sugar-beet Chenopodium-album Seed characteristics Amaranthus-powellii Light interception Spring wheat

Fitness benefits of low infectivity in a spatially structured population of bacteriophages
Published on: 2014
Published by: PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
Sponsored by: United States National Institutes of Health (NIH) National Center for Research Resources (NCRR)
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative Mathematical description
Authored by: Stephen M Krone, Pavitra Roychoudhury, Neelima Shrestha, Valorie R Wiss
Tags

environment invasion Pathogen Life-history Optimality Experimental evolution Viral adaptation Lysis Phi-x174 Plaque

Structural blueprint and ontogeny determine the adaptive value of the plastic response to competition in clonal plants: a modelling approach
Published on: 2014
Published by: EVOLUTIONARY ECOLOGY
Sponsored by: French National Research Agency (ANR)
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative Mathematical description
Authored by: M Garbey, A-K Bittebiere, M Smaoui-Feki, B Clement, C Mony
Tags

Adaptation Spatial dynamics Performance phenotypic plasticity Heterogeneity Integration Communities Grassland perennials Trifolium-repens Growth forms

Modelling biogeochemical fluxes across a Mediterranean fish cage farm
Published on: 2014
Published by: AQUACULTURE ENVIRONMENT INTERACTIONS
Sponsored by: European Union
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative Mathematical description
Authored by: Daniele Brigolin, Virna Loana Meccia, Chiara Venier, Paolo Tomassetti, Salvatore Porrello, Roberto Pastres
Tags

Oxygen-consumption Bass dicentrarchus-labrax European sea-bass Bream sparus-aurata Southwestern new-brunswick Salmon aquaculture Marine ecosystem Waste production Organic-carbon Benthic impact

Defect-Mediated Phase Transitions in Active Soft Matter
Published on: 2014
Published by: PHYS REV LETT
Sponsored by: German Research Foundation (Deutsche Forschungsgemeinschaft, DFG)
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative
Authored by: Christoph A Weber, Christopher Bock, Erwin Frey
Tags

Model Motion Long-range order 2 dimensions Filaments