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Inferring forest fate from demographic data: from vital rates to population dynamic models
Published on: 2018
Published by: PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
Sponsored by: Biotechnology and Biological Sciences Research Council (BBSRC) United States National Science Foundation (NSF)
Platforms: R
Related Files: Code: Paper:
Documentation: Other Narrative Mathematical description
Authored by: Jessica Needham, Cory Merow, Sean M McMahon, Chia-Hao Chang-Yang, Hal Caswell
Tags

individual-based models Forest ecology Diversity Demography Light growth Climate-change Rain-forest Density-dependence Life-history strategies Tropical forest Integral projection models Integral projection models Population projections Tree-size distributions Neotropical tree

Dynamic, spatial models of parasite transmission in wildlife: Their structure, applications and remaining challenges
Published on: 2018
Published by: J ANIM ECOL
Sponsored by: Unknown
Platforms: Unknown
Related Files: Paper:
Documentation: None
Authored by: Lauren A White, James D Forester, Meggan E Craft
Tags

Spatial heterogeneity Spatial Models transmission Wildlife Landscape heterogeneity Pathogen transmission Pathogen Infectious-disease Individual-based model White-tailed deer State-space models Yellowstone-national-park Metapopulation models Stochastic simulation-model Badger meles-meles Emerging infectious-diseases Guppies poecilia-reticulata Parasite Dynamic disease models Social network structure Bovine-tuberculosis Local persistence

Applying a biocomplexity approach to modelling farmer decision-making and land use impacts on wildlife
Published on: 2018
Published by: JOURNAL OF APPLIED ECOLOGY
Sponsored by: Unknown
Platforms: C++
Related Files: Paper:
Documentation: Other Narrative Flow charts
Authored by: Christopher J Topping, Anna Malawska
Tags

Agent-based model agent-based simulation Management Dynamics Diversity Landscape ALMaSS Biodiversity Pesticides Impact assessment population Social-ecological systems Occupancy Agricultural systems Abundance Agroecology Biocomplexity Energy crop Hare Skylark

Three-dimensional experiments and individual based simulations show that cell proliferation drives melanoma nest formation in human skin tissue
Published on: 2018
Published by: BMC SYSTEMS BIOLOGY
Sponsored by: Australian Research Council (ARC)
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative
Authored by: Parvathi Haridas, Matthew J Simpson, Alexander P Browning, Jacqui A McGovern, D L Sean McElwain
Tags

Migration cell migration Cell proliferation Model invasion Cluster Populations In-vitro Colony Nest Quantification Melanoma nest Individual based model Melanoma cells Mathematical simulation 3d human skin model Barrier assay Melanocytic nevi Coculture Benign Assays

Toward optimal implementation of cancer prevention and control programs in public health: a study protocol on mis-implementation
Published on: 2018
Published by: IMPLEMENTATION SCIENCE
Sponsored by: United States National Institutes of Health (NIH)
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative Flow charts
Authored by: Ross A Hammond, Matt Kasman, Margaret Padek, Peg Allen, Paul C Erwin, Melissa Franco, Benjamin Heuberger, Doug A Luke, Stephanie Mazzucca, Sarah Moreland-Russell, Ross C Brownson
Tags

Agent-based models Decision-Making Dissemination childhood obesity Mis-implementation Cancer control Evidence-based interventions Promote physical-activity Systems science methods Local health De-adoption Verb campaign State policy

The impact of automated transit, pedestrian, and bicycling facilities on urban travel patterns
Published on: 2018
Published by: TRANSPORTATION PLANNING AND TECHNOLOGY
Sponsored by: US Federal Highway Administration
Platforms: Unknown
Related Files: Paper:
Documentation: Other Narrative
Authored by: Moira L Zellner, Dean Massey, Yoram Shiftan, Jonathan Levine, Alarcon Maria Arquero de
Tags

Agent-based model Integrated modeling Mode choice agent-based approach transportation Automated transit shuttles Community transit Stated preference

Improving the Brazilian electricity market: how to replace the centralized dispatch by decentralized market-based bidding
Published on: 2018
Published by: JOURNAL OF ENERGY MARKETS
Sponsored by: Unknown
Platforms: MATLAB
Related Files: Paper:
Documentation: Other Narrative Flow charts Mathematical description
Authored by: Felipe A Calabria, Joao Tome Saraiva, A P Rocha
Tags

agent-based simulation (ABS) Brazilian power system Energy reallocation mechanism (mre) Virtual reservoir model (vrm) Q-learning algorithm

Using agent-based modeling to explore policy options supporting adoption of natural gas vehicles in Indonesia
Published on: 2017
Published by: J ENVIRON PSYCHOL
Sponsored by: Unknown
Platforms: NetLogo
Related Files: Paper:
Documentation: Other Narrative Flow charts
Authored by: Bertha Maya Sopha, Christian A Klockner, Dona Febrianti
Tags

Indonesia Agent-Based Social Simulation Innovation diffusion electric vehicles technology Product Impacts Hybrid Natural gas vehicles (ngvs) Adoption decision Policy intervention Fuel-cell vehicles

Agent-based model of self-organized industrial symbiosis
Published on: 2017
Published by: JOURNAL OF CLEANER PRODUCTION
Sponsored by: National Science and Engineering Research Council of Canada (NSERC)
Platforms: NetLogo
Related Files: Paper:
Documentation: Other Narrative Flow charts Mathematical description
Authored by: Mohamed Raouf Ghali, Jean-Marc Frayret, Chahid Ahabchane
Tags

Simulation Agent-based modeling networks Industrial symbiosis dynamics Social embeddedness

Assessing maintenance strategies for cutting tool replacements in mechanized tunneling using process simulation
Published on: 2017
Published by: JOURNAL OF SIMULATION
Sponsored by: German Research Foundation (Deutsche Forschungsgemeinschaft, DFG)
Platforms: AnyLogic
Related Files: Paper:
Documentation: Other Narrative Flow charts
Authored by: Alena Conrads, Markus Scheffer, Hannah Mattern, Markus Koenig, Markus Thewes
Tags

Simulation Planning Model Maintenance Construction Disturbances Engineering Tunneling Cutter wear prediction Tbm