A comparison of stable and fluctuating resources with respect to evolutionary adaptation and life-history traits using individual-based modeling and machine learning
                Authored by Brian MacPherson, Robin Gras, Ryan Scott
                
                    Date Published: 2018
                
                
                    DOI: 10.1016/j.jtbi.2018.09.019
                
                
                    Sponsors:
                    
                        National Science and Engineering Research Council of Canada (NSERC)
                        
                
                
                    Platforms:
                    
                        C++
                        
                
                
                    Model Documentation:
                    
                        Other Narrative
                        
                        Flow charts
                        
                        Mathematical description
                        
                
                
                    Model Code URLs:
                    
                        https://github.com/ScottRyanD/EcoSimSR
                        
                        https://github.com/ScottRyanD/EcoSimFR
                        
                
                Abstract
                There are three non-mutually-exclusive key strategies evolved by gene
pools to cope with fluctuating food resource availability, including
evolutionary adaptation, phenotypic plasticity, and migration. We focus
primarily on evolutionary adaptation and behavioral plasticity, which is
a type of phenotypic plasticity, resulting in life-history changes as
ways of dealing with fluctuations in food resource availability. Using
EcoSim, a predator-prey individual-based model, we compare individuals
with stable food resources with those in environments where there are
fluctuating food resources in terms of adaptation through behavioral
plasticity and evolution. The purpose of our study is to determine
whether evolution and behavioral plasticity truly play a role in
adapting to an environment with fluctuating food resources, as well as
to determine whether there are specific gene divergences between gene
pools in fluctuating. food resource environments versus gene pools where
food resources are relatively stable. An important result of our study
is that individuals in environments that are unstable with respect to
food resource availability exhibited significant differences in
behaviors versus those in environments with stable food resources.
Although behavioral plasticity facilitates a rapid response to unstable
food conditions, our study revealed the evolution of perceptual traits
such as vision range in reaction to fluctuating food resources,
indicating the importance of evolution in adapting to unstable resource
environments in the long run. Moreover, using decision trees, we found
that there were significant behavioral gene divergences between
individuals in environments with fluctuating food resources as opposed
to individuals in environments with stable food resources. (C) 2018
Elsevier Ltd. All rights reserved.
                
Tags
                
                    Individual-based model
                
                    Simulation
                
                    Evolution
                
                    behavior
                
                    Dynamics
                
                    phenotypic plasticity
                
                    Environmental heterogeneity
                
                    population
                
                    Predator-prey system
                
                    Climate-change
                
                    Ecological models
                
                    Responses
                
                    Plasticity
                
                    Food availability
                
                    Developmental plasticity