Effect of underwater visual survey methodology on bias and precision of fish counts: a simulation approach
Authored by Miguel Pessanha Pais, Henrique N Cabral
Date Published: 2018
DOI: 10.7717/pearj.5378
Sponsors:
Portuguese Foundation for Science and Technology (FCT)
Platforms:
NetLogo
Model Documentation:
ODD
Mathematical description
Model Code URLs:
https://www.comses.net/codebases/5305/
Abstract
Bias in underwater visual census has always been elusive. In fact, the
choice of sampling method and the behavioural traits of fish are two of
the most important factors affecting bias, but they are still treated
separately, which leads to arbitrarily chosen sampling methods.
FishCensus, a two-dimensional agent-based model with realistic fish
movement, was used to simulate problematic behavioural traits in SCUBA
diving visual census methods and understand how sampling methodology
affects the precision and bias of counts. Using a fixed true density of
0.3 fish/m(2) and a fixed visibility of 6 m, 10 counts were simulated
for several combinations of parameters for transects (length, width,
speed) and point counts (radius, rotation speed, time), generating
trait-specific heatmaps for bias and precision. In general, point counts
had higher bias and were less precise than transects. Fish attracted to
divers led to the highest bias, while cryptic fish had the most accurate
counts. For point counts, increasing survey time increased bias and
variability, increasing radius reduced bias for most traits but
increased bias in the case of fish that avoid divers. Rotation speed did
not have a significant effect in general, but it increased bias for fish
that avoid divers. Wider and longer transects and a faster swim speed
are beneficial when sampling mobile species, but a narrower, shorter
transect with a slow swim is beneficial for cryptic fish.
Tags
Agent-based model
Individual-based model
Computer simulation
Habitats
Density
Populations
Assemblages
Abundance
Reef-fish
Transect
Detectability
Reef fish
Size-structure
Sampling
Fish behaviour
Underwater
visual census
Fishcensus
Census methods