Modelling ecology and evolution of Foraminifera in the agent-oriented distributed platform

Authored by Pawel Topa, Lukasz Faber, Jaroslaw Tyszka, Maciej Komosinski

Date Published: 2017

DOI: 10.1016/j.jocs.2016.07.009

Sponsors: Polish National Science Center

Platforms: Java AgE

Model Documentation: Other Narrative Flow charts

Model Code URLs: https://evolutus.icsr.agh.edu.pl/display/EV/eVolutusAge+-+wieloagentowy+symulator+otwornic

Abstract

We present a new software platform called eVolutus for simulating evolution of living organisms. We choose Foraminifera as model organisms that represent a group of single-cellular, mainly marine, organisms that construct well fossilisable protective shells. They have lived on Earth for more than 540 million years and have left an extraordinary fossil record that is excellent for testing palaeoecological and evolutionary hypotheses. We use the AgE platform, which is a lightweight agent-oriented platform supporting distributed computation. The paper presents the general architecture of this modelling environment as well as more detailed descriptions of the implemented rules and applied solutions. The utility of this software is demonstrated by presenting the configuration and results of sample experiments. (C) 2016 Elsevier B.V. All rights reserved.

Tags

Agent-based modelling Simulation Multi-agent systems systems Artificial life growth Framework Similarity Gene Shells Organisms Foraminifera